== MykopatGrid available software ==

This list is under construction.



=== Assemblers and related software ===

 * Cap3Assembler
 * MiraAssembler
 * [wiki:Oases]
 * [wiki:Velvet]
 * [wiki:Tablet]
 * [wiki:Trinity] 
 * FastQc
=== Homology searches and alignment ===

 * [wiki:Blast]
 * [wiki:Mafft]
 * MosaikAssembler

=== Programming languages ===

 * Perl [http://www.perl.org] modules for BioPerl [http://www.bioperl.org/wiki/Main_Page] - These are useful if you write your own perl scripts.
 * Python [http://www.python.org] modules for BioPython [http://biopython.org/wiki/Biopython] - The Python ditto to BioPerl.

=== Other software ===
 * [wiki:Blast2Go]
 * [wiki:MrBayes] (not yet installed)