== MykopatGrid available software ==


=== Assemblers and related software ===

 * Software/Cap3
 * Software/Mira
 * Software/Oases
 * Software/Velvet
 * Software/Tablet
 * Software/Trinity
 * Software/FastQc

=== Homology searches and alignment ===

 * Software/NCBIBlast
 * Software/Mafft
 * Software/Mosaik

=== Programming languages and libraries ===

 * Perl [http://www.perl.org] modules for BioPerl [http://www.bioperl.org/wiki/Main_Page] - These are useful if you write your own perl scripts.
 * Python [http://www.python.org] modules for BioPython [http://biopython.org/wiki/Biopython] - The Python ditto to BioPerl.
 * Software/OpenMPI - Message Passing Interface

=== Other software ===
 * Software/Blast2Go
 * Software/MrBayes (not yet installed)