Changes between Version 2 and Version 3 of GridEngine


Ignore:
Timestamp:
Dec 8, 2013, 10:14:13 PM (12 years ago)
Author:
Mikael Brandström Durling
Comment:

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  • GridEngine

    v2 v3  
    88
    99=== Job submission ===
    10 Jobs are submitted with the command !`qsub`. The basic resources that has to be requested are the amount of memory required, and the runtime to allocate to the job. The easiest way to submit jobs is to create a batch file, which contains all commands that should be executed. This file also contains information about job resources and other aspects of how the job should behave.
     10Jobs are submitted with the command !`qsub`. The basic resources that has to be requested are the amount of memory required, and the runtime to allocate to the job. The easiest way to submit jobs is to create a batch file, which contains all commands that should be executed. This file also contains information about job resources and other aspects of how the job should behave. It is good practice to save these job scripts for future reference and to keep track of how you ran your commands.
    1111
    1212A batch file is basically a script run by the normal command shell. All lines will be executed as if they were typed at the prompt. However, lines beginning with a # will be ignored and are used as comments. Furthermore, lines beginning with #$ will be read by qsub to set options for the job, e.g. resource request. An example could be:
     
    5252
    5353=== Deleting running or queuing jobs ===
    54 Running jobs can be cancelled with the command `qdel JOB_ID`.
     54Running jobs can be cancelled with the command `qdel JOB_ID`.
    5555
    5656=== Job history ===
    57 You can get information about resource usage and other metadata regarding finished jobs with the `qacct` command, more specifically `$ qacct -j JOB_ID`.
     57You can get information about resource usage and other metadata regarding finished jobs with the `qacct` command, more specifically `$ qacct -j JOB_ID`.