wiki:Software/BUSCO

Version 1 (modified by Mikael Brandström Durling, 4 years ago) (diff)

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BUSCO

Load procedure: module load busco

The software and instructions can be found on: https://busco.ezlab.org

Mykopat Grid specifics

There are a few notes worth knowing:

  • At the moment, auto-lineage seems broken. Please talk to us if you need it. (Most likely bug in SEPP).
  • When running in --augustus mode, you might need to set BLASTDB_LMDB_MAP_SIZE=1000000 or similar if the makeblastdb step fails. It seems like this is a bug of NCBI-BLAST+

Installed versions

  • 5.1.2