wiki:Software/InterProScan

Version 1 (modified by Mikael Brandström Durling, 4 years ago) (diff)

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InterProScan

Load procedure: `module load interproscan`

Documentation of this stand-alone version of InterProScan can be found on https://interproscan-docs.readthedocs.io/en/latest/

Mykopat Grid specifics

InterproScan? is mostly CPU limited. When submitting jobs, provide a few GB of ram per thread. The best approach when running on large sets of genes is to split the data into chunks and run each chunk as a separate grid job.

Installed versions

  • 5.48 / data 83.0