| | 1 | |
| | 2 | == The Mira Assembler == |
| | 3 | |
| | 4 | We have installed the Mira de novo assembler. |
| | 5 | |
| | 6 | For documentation on the program, see the Mira homepage at http://www.chevreux.org/projects_mira.html |
| | 7 | |
| | 8 | Read carefully how the assembly should be done with your specific dataset. |
| | 9 | |
| | 10 | Mira uses fairly large amounts of memory. Luckily, there is a small program included to estimate the memory needs. It's called miramem. |
| | 11 | Just run it once you have logged in to my-mgrid and answer the questions. Take the estimate given by miramem and add 5GB to it when |
| | 12 | you request memory for your run on the grid (in the job script). |
| | 13 | |
| | 14 | |