Changes between Version 72 and Version 73 of Software


Ignore:
Timestamp:
Feb 23, 2021, 4:02:36 PM (4 years ago)
Author:
Mikael Brandström Durling
Comment:

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Legend:

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  • Software

    v72 v73  
    77
    88=== Alignment
     9  * [[Software/Bowtie2]] - Fast short read aligner
     10  * [[Software/Diamond]] - Sequence aligner for protein and translated DNA searches (Version 0.9.26)
     11  * [[Software/Infernal]] - Inference of RNA alignments
    912  * [[Software/GmapGsnap]] - GMAP/GSNAP short read mapper/aligner for RNASeq and genomic data
    1013  * [[Software/Mafft]] - Multiple sequence alignment program (Version 7.450)
    … …  
    2730
    2831=== Sequence analysis
    29   * [[Software/Diamond]] - Sequence aligner for protein and translated DNA searches (Version 0.9.26)
    30   * [[Software/Fxtract]] - Extract sequences from a fastx file given a subsequence or identifier (Version 2.3)   
     32   * [[Software/Fxtract]] - Extract sequences from a fastx file given a subsequence or identifier (Version 2.3)   
    3133  * [[Software/HMMER]] - Biosequence analysis using profile hidden Markov models (Version 3.2.1) 
    3234  * [[Software/OrfM]] - A simple and not slow open reading frame (ORF) caller (Version 0.7.1)
    … …  
    3739  * [[Software/TRF ]] - Software for finding tandem repeats in genomic sequences
    3840  * [[Software/mfqe ]] - FASTA/FASTQ extractor for multiple sets of read names (Version 0.5.0)
    39   * [[Software/Infernal]] - Inference of RNA alignments
    4041  * [[Software/BCFtools]] - Analysis and handling of VCF/BCF (Variant Call Format) files
    4142