MykopatGrid? available software

This list is under construction.

Fastqc

Assemblers and related software

• Cap3Assembler?
• MiraAssembler?
• Oases?
• Velvet?
• Tablet?

Homology searches and alignment

• Blast?
• Mafft?
• Assembler?

Programming languages

• Perl ​http://www.perl.org modules for BioPerl? ​http://www.bioperl.org/wiki/Main_Page - These are useful if you write your own perl scripts.
• Python ​http://www.python.org modules for BioPython? ​http://biopython.org/wiki/Biopython - The Python ditto to BioPerl?.

Other software

• Blast2Go?
• MrBayes? (not yet installed)