wiki:Software

Version 6 (modified by Patrik Söderström, 13 years ago) (diff)

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MykopatGrid? available software

This list is under construction.

  • MiraAssembler? -
  • Cap3Assembler? -
  • Blast? - he Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches. BLAST can be used to infer functional and evolutionary relationships between sequences as well as help identify members of gene families.
  • Blast2Go? - Blast2GO is an ALL in ONE tool for functional annotation of (novel) sequences and the analysis of annotation data. This service runs locally on our grid but uses a Java interface to link with the Blast2Go servers