Changes between Version 26 and Version 27 of WikiStart


Ignore:
Timestamp:
Mar 25, 2013, 1:11:28 PM (12 years ago)
Author:
Mikael Brandström Durling
Comment:

--

Legend:

Unmodified
Added
Removed
Modified
  • WikiStart

    v26 v27  
    1 
    2 
    31== Welcome to the Mykopat Grid Wiki ==
    4 
    52== What is the Mykopat Computing Grid? ==
    63The computing grid has been setup for users to be able to analyse very large genetic data sets, and other analysis requiring long computing times on Linux systems. A grid of computers is essentially a number of computers linked together by a common management software. The management software delegates how the job requests should be handled by the computer resources.
     
    85Currently our grid consists of five computers available around the clock for long running high-resource jobs. Four of these have 32 GB RAM, while the last is equipped with 82GB RAM. In addition to this we are also adding normal desktop computers as a part of the grid during non-office hours. Currently this adds somewhat more than 33 extra cores for short-running low-memory tasks.
    96
    10 How to log in:
    11 There are several ways to access the grid:
     7How to log in: There are several ways to access the grid:
     8
    129 1. From Macs and other unix-like computers you can login using the ssh-command in the terminal. You will then interact with the grid though commands in the terminal.
    13  2. From Windows computers, you can login using Putty to login to a terminal session. You will then interact with the grid though commands in the terminal.
    14  3. There is also an option to start a Remote Desktop on the grid.
     10 1. From Windows computers, you can login using Putty to login to a terminal session. You will then interact with the grid though commands in the terminal.
     11 1. There is also an option to start a Remote Desktop on the grid.
    1512
    1613Login command- click here
     
    1916
    2017== Projects ==
    21 
    2218You should register for a project before running analyses on the grid. This will give you a project directory available for all members, as well as provide a fair sharing of run time on the grid. Without any project assigned, the priority of your grid jobs will be very low.
    2319
    2420There are some commands related to projects described on the ProjectCommands page.
    2521
    26 In short:
     22In short:
     23
    2724 * All project files should go into the project directory (/proj/project-name)
    28  * Before cd:ing into the project directory, use the ```proj``` command your role into a member of that project (e.g. once logged in ```proj my-project-name``` and the ```cd proj/my-project-name```)
     25 * Before cd:ing into the project directory, use the `proj` command your role into a member of that project (e.g. once logged in `proj my-project-name` and the `cd proj/my-project-name`)
    2926
    3027'''[wiki:FrequentlyAskedQuestions Frequently Asked Questions]'''
    3128
    3229Go here to find out information about common problems (for example: installing software in your local folder)
     30
     31== Project Web Services ==
     32For each project a number of !WebServices are available to use. These include:
     33
     34 * Project web folder 
     35 * Subversion for version control of project files
     36 * Trac for project documentation (includes a wiki like this, issue handling and a nice browser for subversion)
     37
     38
    3339
    3440'''[wiki:Software Installed Software]'''