This document is not ready.

[15:44:06][mikaelb(mykopat-grid-admin)@my-mgrid: /opt/sources]$ rm -rf ~/.cpan && perl -MCPAN -e shell

CPAN.pm requires configuration, but most of it can be done automatically.
If you answer 'no' below, you will enter an interactive dialog for each
configuration option instead.   

Would you like to configure as much as possible automatically? [yes]

Autoconfigured everything but 'urllist'.

Now you need to choose your CPAN mirror sites.  You can let me
pick mirrors for you, you can select them from a list or you
can enter them by hand.

Would you like me to automatically choose some CPAN mirror
sites for you? (This means connecting to the Internet) [yes] 
Trying to fetch a mirror list from the Internet
Fetching with LWP:
http://www.perl.org/CPAN/MIRRORED.BY

Looking for CPAN mirrors near you (please be patient)
......................... done!

New urllist
  http://www.cpan.dk/
  http://mirrors.dotsrc.org/cpan/
  http://artfiles.org/cpan.org/

Autoconfiguration complete.

commit: wrote '/net/gridnas4/volume3/home1/mikaelb/.cpan/CPAN/MyConfig.pm'

You can re-run configuration any time with 'o conf init' in the CPAN shell

cpan shell -- CPAN exploration and modules installation (v1.9800)
Enter 'h' for help.

                                                                                                                                                                                                                                                               
cpan[1]> i /bioperl/                              
Fetching with LWP:
http://www.cpan.dk/authors/01mailrc.txt.gz
Reading '/net/gridnas4/volume3/home1/mikaelb/.cpan/sources/authors/01mailrc.txt.gz'
............................................................................DONE
Fetching with LWP:
http://www.cpan.dk/modules/02packages.details.txt.gz
Reading '/net/gridnas4/volume3/home1/mikaelb/.cpan/sources/modules/02packages.details.txt.gz'
  Database was generated on Mon, 10 Sep 2012 13:35:04 GMT
............................................................................DONE
Fetching with LWP:
http://www.cpan.dk/modules/03modlist.data.gz
Reading '/net/gridnas4/volume3/home1/mikaelb/.cpan/sources/modules/03modlist.data.gz'
............................................................................DONE
Writing /net/gridnas4/volume3/home1/mikaelb/.cpan/Metadata
Bundle    Bundle::BioPerl        (CRAFFI/Bundle-BioPerl-2.1.8.tar.gz)
Distribution    BOZO/Fry-Lib-BioPerl-0.15.tar.gz
Distribution    CJFIELDS/BioPerl-1.6.1.tar.gz
Distribution    CJFIELDS/BioPerl-1.6.901.tar.gz
Distribution    CJFIELDS/BioPerl-DB-1.006900.tar.gz
Distribution    CJFIELDS/BioPerl-Network-1.006902.tar.gz
Distribution    CJFIELDS/BioPerl-Run-1.006900.tar.gz
Distribution    CJFIELDS/Dist-Zilla-PluginBundle-BioPerl-0.02.tar.gz
Distribution    CRAFFI/Bundle-BioPerl-2.1.8.tar.gz
Distribution    RBUELS/Dist-Zilla-PluginBundle-Bioperl-0.01.tar.gz
Module  < Bio::LiveSeq::IO::BioPerl (CJFIELDS/BioPerl-1.6.901.tar.gz)
Module  < Dist::Zilla::PluginBundle::BioPerl (CJFIELDS/Dist-Zilla-PluginBundle-BioPerl-0.02.tar.gz)
Module  < Dist::Zilla::PluginBundle::Bioperl (RBUELS/Dist-Zilla-PluginBundle-Bioperl-0.01.tar.gz)
Module  < Fry::Lib::BioPerl      (BOZO/Fry-Lib-BioPerl-0.15.tar.gz)
Author          BIOPERLML ("Bioperl-l" <bioperl-l@lists.open-bio.org>)
15 items found

cpan[2]> o conf makepl_arg PREFIX=/opt/sw/bioperl/2.1.8
    makepl_arg         [PREFIX=/opt/sw/bioperl/2.1.8]
Please use 'o conf commit' to make the config permanent!


 cpan[3]> conf mbuildpl_arg "--prefix /opt/sw/bioperl/2.1.8"
Please use 'o conf commit' to make the config permanent!

cpan[4]> install Bundle::BioPerl
[... lots of output ]