Changes between Version 1 and Version 2 of Software/KofamScan

Timestamp:

Aug 2, 2024, 3:16:56 PM (5 months ago)

Author:

ausa0001

Comment:

--

Software/KofamScan

@@ -1 +1 @@
 == KofamScan ==
-
-Load procedure: !`module load kofamscan` 
 
 Documentation can be found at https://www.genome.jp/tools/kofamkoala/ 
@@ -8 +6 @@
 Example run:
 module load kofamscan
+
 module load parallel
+
 module load hmmer
 
 cd /opt/sw/kofamscan/1.3.0
+
 for file in /proj/mykopat-metagenome/gtdb_denitdnra/genomes_denitDNRA_prodigal_faa/*faa; do ./bin/exec_annotation -f detail-tsv --cpu 32 -o "${file%_protein.faa}"_KOs.txt "$file"; done