wiki:Software/GraftM

Version 4 (modified by ausa0001, 5 years ago) (diff)

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GraftM

Load procedure: module load graftm

The software and instructions can be found on: https://pypi.org/project/graftm/

Mykopat Grid specifics

Load the following modules to use all the features of GraftM:

  • orfm
  • hmmer
  • fxtract
  • pplacer
  • krona
  • mafft
  • diamond

Call software using the graftM command

Installed versions

  • 0.12.2