wiki:Software/GraftM

Version 5 (modified by ausa0001, 6 years ago) ( diff )

--

GraftM

Load procedure: module load graftm

The software and instructions can be found on: ​https://pypi.org/project/graftm/

Mykopat Grid specifics

Load the following modules to use all the features of graftM:

  • orfm
  • hmmer
  • fxtract
  • pplacer
  • krona
  • mafft
  • diamond

Call software using the graftM command

Installed versions

  • 0.12.2
Note: See TracWiki for help on using the wiki.