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MykopatGrid available software
Assemblers and related software
- Software/Cap3
- Software/Mira
- Software/Oases
- Software/Velvet
- Software/Tablet
- Software/Trinity
- Software/FastQc
Homology searches and alignment
- Software/NCBIBlast
- Software/Mafft
- Software/Mosaik
Programming languages and libraries
- Perl http://www.perl.org modules for BioPerl http://www.bioperl.org/wiki/Main_Page - These are useful if you write your own perl scripts.
- Python http://www.python.org modules for BioPython http://biopython.org/wiki/Biopython - The Python ditto to BioPerl.
- Software/OpenMPI - Message Passing Interface
Other software
- Software/Blast2Go
- Software/MrBayes (not yet installed)
Note:
See TracWiki
for help on using the wiki.
